Spectrum Mill - Sherenga
de novo
Sequencing
Spectrum Mill
Spectrum Summary
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Sherenga
de novo
Sequencing
Remove all prior Sherenga results
Maximize CPUs
Maximum reported hits:
Batch size:
1
5
500
1000
5000
Validation filter:
spectrum-not-marked-sequence-not-validated
good-spectrum-sequence-not-validated
valid
all
Show Equivalent Masses
I/L:
I
L
K/Q:
K
Q
Both
Data Directory
(none selected)
Modifications
Fixed:
Variable:
Sequencing Parameters
Scoring:
Agilent ESI Q-TOF
ESI Q Exactive HCD 35 0.01503
ESI Q Exactive HCD HLA 0.01503
ESI Q Exactive HCD HLA 0.01503 nispyrt
ESI Q Exactive HCD HLA yb 0.01503
ESI ion trap
Min. vertex score:
Scoring 2:
none
ESI Q Exactive HCD HLA 0.01503
ESI Q Exactive HCD HLA 0.01503 nispyrt
Data Files
Spectrum files:
*.2.pkl *.3.pkl
Advanced Parameters
Correct precursor m/z via b/y pairs:
Yes
No
Both
Spectrum graph search direction:
>>>
<<<
Both
Vertex stack size:
Allow di- and tripeptide gaps:
True
False
Penalize for missing ions:
True
False
Use intensity thresholds:
True
False
Acknowledgment of submission to SRM request queue